Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 AC092919.2-201ENST00000623631 1645 ntBASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 AC140658.5-201ENST00000438532 169 ntBASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 AC034105.1-201ENST00000563488 319 ntBASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 AL078644.1-201ENST00000609881 752 ntBASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL3Q8IVW4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 AC092474.2-201ENST00000424288 719 ntBASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 AC004877.2-201ENST00000623941 599 ntBASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms