Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 MIR4741-201ENST00000579822 90 ntBASIC15.68■□□□□ 0.1
RIF1Q5UIP0 LINC01451-201ENST00000623792 534 ntBASIC15.68■□□□□ 0.1
RIF1Q5UIP0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 AC044849.1-201ENST00000519737 1188 ntBASIC15.67■□□□□ 0.1
RIF1Q5UIP0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 FO393414.2-201ENST00000405153 598 ntBASIC15.67■□□□□ 0.1
RIF1Q5UIP0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 AC138649.2-201ENST00000615886 705 ntBASIC15.67■□□□□ 0.1
RIF1Q5UIP0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIF1Q5UIP0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 RPL13P2-201ENST00000440687 659 ntBASIC15.66■□□□□ 0.1
RIF1Q5UIP0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 RN7SL736P-201ENST00000613111 269 ntBASIC15.66■□□□□ 0.1
RIF1Q5UIP0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIF1Q5UIP0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RIF1Q5UIP0 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.65■□□□□ 0.1
RIF1Q5UIP0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIF1Q5UIP0 AC104581.1-202ENST00000635932 2618 ntBASIC15.65■□□□□ 0.1
RIF1Q5UIP0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIF1Q5UIP0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIF1Q5UIP0 AL136982.4-201ENST00000437689 1740 ntBASIC15.65■□□□□ 0.1
RIF1Q5UIP0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.65■□□□□ 0.1
RIF1Q5UIP0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
RIF1Q5UIP0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIF1Q5UIP0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms