Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
USH1GQ495M9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
USH1GQ495M9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.76■□□□□ 0.59
USH1GQ495M9 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.76■□□□□ 0.59
USH1GQ495M9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 AC024267.1-201ENST00000582320 895 ntBASIC18.76■□□□□ 0.59
USH1GQ495M9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.76■□□□□ 0.59
USH1GQ495M9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.76■□□□□ 0.59
USH1GQ495M9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.76■□□□□ 0.59
USH1GQ495M9 AL590560.3-201ENST00000623350 461 ntBASIC18.76■□□□□ 0.59
USH1GQ495M9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.76■□□□□ 0.59
USH1GQ495M9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
USH1GQ495M9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
USH1GQ495M9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.75■□□□□ 0.59
USH1GQ495M9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
USH1GQ495M9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
USH1GQ495M9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.75■□□□□ 0.59
USH1GQ495M9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.75■□□□□ 0.59
USH1GQ495M9 MIR661-201ENST00000384842 89 ntBASIC18.75■□□□□ 0.59
USH1GQ495M9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.75■□□□□ 0.59
USH1GQ495M9 TSPY16P-201ENST00000449843 468 ntBASIC18.75■□□□□ 0.59
USH1GQ495M9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.75■□□□□ 0.59
USH1GQ495M9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.75■□□□□ 0.59
USH1GQ495M9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.75■□□□□ 0.59
USH1GQ495M9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.75■□□□□ 0.59
USH1GQ495M9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.75■□□□□ 0.59
USH1GQ495M9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
USH1GQ495M9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.75■□□□□ 0.59
USH1GQ495M9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.75■□□□□ 0.59
USH1GQ495M9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USH1GQ495M9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 CETN4P-206ENST00000642099 2168 ntBASIC18.75■□□□□ 0.59
USH1GQ495M9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USH1GQ495M9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
USH1GQ495M9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.74■□□□□ 0.59
USH1GQ495M9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.74■□□□□ 0.59
USH1GQ495M9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.74■□□□□ 0.59
USH1GQ495M9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.74■□□□□ 0.59
USH1GQ495M9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.74■□□□□ 0.59
USH1GQ495M9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 AC236430.1-201ENST00000402231 743 ntBASIC18.74■□□□□ 0.59
USH1GQ495M9 RPL37AP1-201ENST00000412502 279 ntBASIC18.74■□□□□ 0.59
USH1GQ495M9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
USH1GQ495M9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.74■□□□□ 0.59
USH1GQ495M9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.74■□□□□ 0.59
USH1GQ495M9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.74■□□□□ 0.59
USH1GQ495M9 AL133215.2-201ENST00000609242 977 ntBASIC18.74■□□□□ 0.59
USH1GQ495M9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
USH1GQ495M9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.74■□□□□ 0.59
USH1GQ495M9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.74■□□□□ 0.59
USH1GQ495M9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
USH1GQ495M9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
USH1GQ495M9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
USH1GQ495M9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
USH1GQ495M9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
USH1GQ495M9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
USH1GQ495M9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.73■□□□□ 0.59
USH1GQ495M9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.73■□□□□ 0.59
USH1GQ495M9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms