Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
COL16A1Q07092 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC21.57■■□□□ 1.04
COL16A1Q07092 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL16A1Q07092 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL16A1Q07092 SLC25A24-204ENST00000569674 2357 ntBASIC21.57■■□□□ 1.04
COL16A1Q07092 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL16A1Q07092 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL16A1Q07092 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COL16A1Q07092 AC135050.7-201ENST00000624508 2218 ntBASIC21.56■■□□□ 1.04
COL16A1Q07092 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL16A1Q07092 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
COL16A1Q07092 ACTG1P2-201ENST00000415776 1125 ntBASIC21.56■■□□□ 1.04
COL16A1Q07092 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.56■■□□□ 1.04
COL16A1Q07092 ACTG1P11-201ENST00000425411 1125 ntBASIC21.56■■□□□ 1.04
COL16A1Q07092 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
COL16A1Q07092 RN7SL181P-201ENST00000462921 277 ntBASIC21.56■■□□□ 1.04
COL16A1Q07092 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.56■■□□□ 1.04
COL16A1Q07092 COX5BP1-201ENST00000507622 393 ntBASIC21.56■■□□□ 1.04
COL16A1Q07092 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC21.56■■□□□ 1.04
COL16A1Q07092 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC21.56■■□□□ 1.04
COL16A1Q07092 PTK2-225ENST00000520892 571 ntTSL 4 BASIC21.56■■□□□ 1.04
COL16A1Q07092 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL16A1Q07092 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC21.56■■□□□ 1.04
COL16A1Q07092 RN7SL736P-201ENST00000613111 269 ntBASIC21.56■■□□□ 1.04
COL16A1Q07092 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC21.56■■□□□ 1.04
COL16A1Q07092 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL16A1Q07092 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL16A1Q07092 DRD5P1-201ENST00000456605 1438 ntBASIC21.56■■□□□ 1.04
COL16A1Q07092 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL16A1Q07092 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.56■■□□□ 1.04
COL16A1Q07092 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL16A1Q07092 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.56■■□□□ 1.04
COL16A1Q07092 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL16A1Q07092 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
COL16A1Q07092 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
COL16A1Q07092 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.55■■□□□ 1.04
COL16A1Q07092 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
COL16A1Q07092 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC21.55■■□□□ 1.04
COL16A1Q07092 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC21.55■■□□□ 1.04
COL16A1Q07092 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.55■■□□□ 1.04
COL16A1Q07092 KLK11-210ENST00000600362 759 ntTSL 3 BASIC21.55■■□□□ 1.04
COL16A1Q07092 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.55■■□□□ 1.04
COL16A1Q07092 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC21.55■■□□□ 1.04
COL16A1Q07092 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 AC098818.2-201ENST00000564925 2320 ntBASIC21.55■■□□□ 1.04
COL16A1Q07092 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 AC004987.2-201ENST00000395959 1148 ntBASIC21.55■■□□□ 1.04
COL16A1Q07092 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 AC079178.1-201ENST00000420915 656 ntBASIC21.55■■□□□ 1.04
COL16A1Q07092 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 KRT18P43-201ENST00000469825 1281 ntBASIC21.55■■□□□ 1.04
COL16A1Q07092 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21.55■■□□□ 1.04
COL16A1Q07092 AC024681.1-201ENST00000521917 487 ntBASIC21.55■■□□□ 1.04
COL16A1Q07092 NPM1P43-201ENST00000558669 786 ntBASIC21.55■■□□□ 1.04
COL16A1Q07092 FOS-202ENST00000535987 1402 ntTSL 2 BASIC21.55■■□□□ 1.04
COL16A1Q07092 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL16A1Q07092 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
COL16A1Q07092 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.54■■□□□ 1.04
COL16A1Q07092 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC21.54■■□□□ 1.04
COL16A1Q07092 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.54■■□□□ 1.04
COL16A1Q07092 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC21.54■■□□□ 1.04
COL16A1Q07092 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC21.54■■□□□ 1.04
COL16A1Q07092 AP001582.1-201ENST00000525856 295 ntBASIC21.54■■□□□ 1.04
COL16A1Q07092 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC21.54■■□□□ 1.04
COL16A1Q07092 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC21.54■■□□□ 1.04
COL16A1Q07092 AC093813.1-201ENST00000605066 256 ntBASIC21.54■■□□□ 1.04
COL16A1Q07092 AC091544.8-201ENST00000619490 361 ntBASIC21.54■■□□□ 1.04
COL16A1Q07092 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.54■■□□□ 1.04
COL16A1Q07092 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL16A1Q07092 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.54■■□□□ 1.04
COL16A1Q07092 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.54■■□□□ 1.04
COL16A1Q07092 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
COL16A1Q07092 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 PCDHB17P-201ENST00000539533 2393 ntBASIC21.53■■□□□ 1.04
COL16A1Q07092 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.53■■□□□ 1.04
COL16A1Q07092 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 AC092053.1-201ENST00000605787 1936 ntBASIC21.53■■□□□ 1.04
COL16A1Q07092 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms