Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SKOR1P84550 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.27■□□□□ 0.36
SKOR1P84550 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SKOR1P84550 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKOR1P84550 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.27■□□□□ 0.36
SKOR1P84550 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SKOR1P84550 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKOR1P84550 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SKOR1P84550 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKOR1P84550 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKOR1P84550 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SKOR1P84550 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SKOR1P84550 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.27■□□□□ 0.36
SKOR1P84550 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.27■□□□□ 0.36
SKOR1P84550 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.27■□□□□ 0.36
SKOR1P84550 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.27■□□□□ 0.36
SKOR1P84550 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
SKOR1P84550 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SKOR1P84550 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SKOR1P84550 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SKOR1P84550 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SKOR1P84550 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SKOR1P84550 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SKOR1P84550 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SKOR1P84550 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SKOR1P84550 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SKOR1P84550 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
SKOR1P84550 PI4KAP1-204ENST00000612579 1703 ntBASIC17.27■□□□□ 0.35
SKOR1P84550 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
SKOR1P84550 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SKOR1P84550 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SKOR1P84550 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SKOR1P84550 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SKOR1P84550 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SKOR1P84550 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.26■□□□□ 0.35
SKOR1P84550 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.26■□□□□ 0.35
SKOR1P84550 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 AP005117.1-202ENST00000581724 1908 ntBASIC17.26■□□□□ 0.35
SKOR1P84550 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.26■□□□□ 0.35
SKOR1P84550 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.26■□□□□ 0.35
SKOR1P84550 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 AC120057.1-201ENST00000483947 663 ntBASIC17.26■□□□□ 0.35
SKOR1P84550 PGAM5P1-201ENST00000518923 814 ntBASIC17.26■□□□□ 0.35
SKOR1P84550 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.26■□□□□ 0.35
SKOR1P84550 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.26■□□□□ 0.35
SKOR1P84550 MIR1199-201ENST00000621445 119 ntBASIC17.26■□□□□ 0.35
SKOR1P84550 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.26■□□□□ 0.35
SKOR1P84550 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SKOR1P84550 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SKOR1P84550 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SKOR1P84550 ZNF259P1-201ENST00000407656 1365 ntBASIC17.26■□□□□ 0.35
SKOR1P84550 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.26■□□□□ 0.35
SKOR1P84550 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKOR1P84550 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.25■□□□□ 0.35
SKOR1P84550 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SKOR1P84550 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SKOR1P84550 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SKOR1P84550 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SKOR1P84550 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.25■□□□□ 0.35
SKOR1P84550 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.25■□□□□ 0.35
SKOR1P84550 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.25■□□□□ 0.35
SKOR1P84550 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.25■□□□□ 0.35
SKOR1P84550 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.25■□□□□ 0.35
SKOR1P84550 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.25■□□□□ 0.35
SKOR1P84550 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SKOR1P84550 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.25■□□□□ 0.35
SKOR1P84550 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKOR1P84550 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms