Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.08■□□□□ 0.64
IRX3P78415 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.08■□□□□ 0.64
IRX3P78415 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.08■□□□□ 0.64
IRX3P78415 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.08■□□□□ 0.64
IRX3P78415 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.08■□□□□ 0.64
IRX3P78415 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
IRX3P78415 TP53TG3HP-202ENST00000569755 579 ntBASIC19.08■□□□□ 0.64
IRX3P78415 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.08■□□□□ 0.64
IRX3P78415 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.08■□□□□ 0.64
IRX3P78415 AL359881.2-201ENST00000602973 570 ntBASIC19.08■□□□□ 0.64
IRX3P78415 AC013467.2-201ENST00000605472 835 ntBASIC19.08■□□□□ 0.64
IRX3P78415 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
IRX3P78415 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 C1R-202ENST00000536053 2347 ntTSL 2 BASIC19.08■□□□□ 0.64
IRX3P78415 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
IRX3P78415 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
IRX3P78415 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.07■□□□□ 0.64
IRX3P78415 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.07■□□□□ 0.64
IRX3P78415 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
IRX3P78415 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.07■□□□□ 0.64
IRX3P78415 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
IRX3P78415 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
IRX3P78415 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.07■□□□□ 0.64
IRX3P78415 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
IRX3P78415 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.07■□□□□ 0.64
IRX3P78415 AC007274.1-201ENST00000439805 662 ntBASIC19.07■□□□□ 0.64
IRX3P78415 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.07■□□□□ 0.64
IRX3P78415 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
IRX3P78415 AC140912.1-201ENST00000577171 1054 ntBASIC19.07■□□□□ 0.64
IRX3P78415 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
IRX3P78415 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.07■□□□□ 0.64
IRX3P78415 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.07■□□□□ 0.64
IRX3P78415 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.07■□□□□ 0.64
IRX3P78415 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.07■□□□□ 0.64
IRX3P78415 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
IRX3P78415 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.07■□□□□ 0.64
IRX3P78415 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
IRX3P78415 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX3P78415 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.06■□□□□ 0.64
IRX3P78415 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
IRX3P78415 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.06■□□□□ 0.64
IRX3P78415 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
IRX3P78415 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
IRX3P78415 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
IRX3P78415 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.06■□□□□ 0.64
IRX3P78415 AL353779.1-201ENST00000434793 351 ntBASIC19.06■□□□□ 0.64
IRX3P78415 AC135586.1-201ENST00000539323 574 ntBASIC19.06■□□□□ 0.64
IRX3P78415 BANF1P1-201ENST00000553684 263 ntBASIC19.06■□□□□ 0.64
IRX3P78415 AL079307.3-201ENST00000556114 283 ntBASIC19.06■□□□□ 0.64
IRX3P78415 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.06■□□□□ 0.64
IRX3P78415 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.06■□□□□ 0.64
IRX3P78415 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.06■□□□□ 0.64
IRX3P78415 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.06■□□□□ 0.64
IRX3P78415 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.06■□□□□ 0.64
IRX3P78415 AC004840.1-201ENST00000636359 365 ntBASIC19.06■□□□□ 0.64
IRX3P78415 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
IRX3P78415 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms