Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.45□□□□□ -0.1
UBE2NP61088 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
UBE2NP61088 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
UBE2NP61088 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
UBE2NP61088 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
UBE2NP61088 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
UBE2NP61088 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
UBE2NP61088 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 PCGF3-213ENST00000620529 1899 ntBASIC14.44□□□□□ -0.1
UBE2NP61088 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.44□□□□□ -0.1
UBE2NP61088 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.44□□□□□ -0.1
UBE2NP61088 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
UBE2NP61088 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.44□□□□□ -0.1
UBE2NP61088 AC004461.1-201ENST00000412461 403 ntBASIC14.44□□□□□ -0.1
UBE2NP61088 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.44□□□□□ -0.1
UBE2NP61088 PRYP6-201ENST00000514804 343 ntBASIC14.44□□□□□ -0.1
UBE2NP61088 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.44□□□□□ -0.1
UBE2NP61088 KRT8P23-201ENST00000560090 1207 ntBASIC14.44□□□□□ -0.1
UBE2NP61088 AC243562.1-201ENST00000560672 389 ntBASIC14.44□□□□□ -0.1
UBE2NP61088 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.44□□□□□ -0.1
UBE2NP61088 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.44□□□□□ -0.1
UBE2NP61088 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.44□□□□□ -0.1
UBE2NP61088 AC027307.2-201ENST00000591252 911 ntBASIC14.44□□□□□ -0.1
UBE2NP61088 AP001160.2-201ENST00000596071 487 ntBASIC14.44□□□□□ -0.1
UBE2NP61088 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.44□□□□□ -0.1
UBE2NP61088 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.44□□□□□ -0.1
UBE2NP61088 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
UBE2NP61088 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.44□□□□□ -0.1
UBE2NP61088 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.44□□□□□ -0.1
UBE2NP61088 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
UBE2NP61088 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.44□□□□□ -0.1
UBE2NP61088 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.44□□□□□ -0.1
UBE2NP61088 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2NP61088 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.44□□□□□ -0.1
UBE2NP61088 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
UBE2NP61088 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
UBE2NP61088 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
UBE2NP61088 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
UBE2NP61088 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
UBE2NP61088 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UBE2NP61088 KRT18P32-201ENST00000424695 1287 ntBASIC14.43□□□□□ -0.1
UBE2NP61088 SPCS2P4-201ENST00000436160 681 ntBASIC14.43□□□□□ -0.1
UBE2NP61088 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.43□□□□□ -0.1
UBE2NP61088 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UBE2NP61088 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.43□□□□□ -0.1
UBE2NP61088 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
UBE2NP61088 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
UBE2NP61088 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 GGT4P-201ENST00000623672 1708 ntBASIC14.43□□□□□ -0.1
UBE2NP61088 LINC01144-201ENST00000626198 1710 ntBASIC14.43□□□□□ -0.1
UBE2NP61088 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.43□□□□□ -0.1
UBE2NP61088 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2NP61088 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
UBE2NP61088 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.42□□□□□ -0.1
UBE2NP61088 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2NP61088 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms