Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MCCD1P59942 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MCCD1P59942 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.43■□□□□ 0.38
MCCD1P59942 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MCCD1P59942 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MCCD1P59942 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MCCD1P59942 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.43■□□□□ 0.38
MCCD1P59942 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
MCCD1P59942 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MCCD1P59942 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.43■□□□□ 0.38
MCCD1P59942 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
MCCD1P59942 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.42■□□□□ 0.38
MCCD1P59942 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 AC134407.2-201ENST00000625089 1978 ntBASIC17.42■□□□□ 0.38
MCCD1P59942 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.42■□□□□ 0.38
MCCD1P59942 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
MCCD1P59942 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
MCCD1P59942 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MCCD1P59942 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
MCCD1P59942 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.42■□□□□ 0.38
MCCD1P59942 HIST3H2BA-201ENST00000436555 524 ntBASIC17.42■□□□□ 0.38
MCCD1P59942 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.42■□□□□ 0.38
MCCD1P59942 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.42■□□□□ 0.38
MCCD1P59942 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.42■□□□□ 0.38
MCCD1P59942 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.42■□□□□ 0.38
MCCD1P59942 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.42■□□□□ 0.38
MCCD1P59942 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
MCCD1P59942 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.42■□□□□ 0.38
MCCD1P59942 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MCCD1P59942 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MCCD1P59942 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.41■□□□□ 0.38
MCCD1P59942 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.41■□□□□ 0.38
MCCD1P59942 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MCCD1P59942 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MCCD1P59942 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MCCD1P59942 KRT18P13-201ENST00000400056 1290 ntBASIC17.41■□□□□ 0.38
MCCD1P59942 RBPMS2P1-201ENST00000437762 623 ntBASIC17.41■□□□□ 0.38
MCCD1P59942 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.41■□□□□ 0.38
MCCD1P59942 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.41■□□□□ 0.38
MCCD1P59942 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.41■□□□□ 0.38
MCCD1P59942 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.41■□□□□ 0.38
MCCD1P59942 AC105021.1-202ENST00000570572 669 ntBASIC17.41■□□□□ 0.38
MCCD1P59942 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MCCD1P59942 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MCCD1P59942 AC026979.3-201ENST00000607315 403 ntBASIC17.41■□□□□ 0.38
MCCD1P59942 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.41■□□□□ 0.38
MCCD1P59942 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MCCD1P59942 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.4■□□□□ 0.38
MCCD1P59942 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MCCD1P59942 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
MCCD1P59942 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MCCD1P59942 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MCCD1P59942 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.4■□□□□ 0.38
MCCD1P59942 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.4■□□□□ 0.38
MCCD1P59942 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MCCD1P59942 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MCCD1P59942 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MCCD1P59942 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.4■□□□□ 0.38
MCCD1P59942 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MCCD1P59942 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MCCD1P59942 AL139400.1-201ENST00000366220 510 ntBASIC17.4■□□□□ 0.38
MCCD1P59942 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.4■□□□□ 0.38
MCCD1P59942 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.4■□□□□ 0.38
MCCD1P59942 DNAJB3-202ENST00000449667 1266 ntBASIC17.4■□□□□ 0.38
MCCD1P59942 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.4■□□□□ 0.38
MCCD1P59942 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.4■□□□□ 0.38
MCCD1P59942 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.4■□□□□ 0.38
MCCD1P59942 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
MCCD1P59942 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms