Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.26■□□□□ 0.03
PER3P56645 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.26■□□□□ 0.03
PER3P56645 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.26■□□□□ 0.03
PER3P56645 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PER3P56645 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.26■□□□□ 0.03
PER3P56645 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PER3P56645 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.26■□□□□ 0.03
PER3P56645 AC236430.1-201ENST00000402231 743 ntBASIC15.26■□□□□ 0.03
PER3P56645 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PER3P56645 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.26■□□□□ 0.03
PER3P56645 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.26■□□□□ 0.03
PER3P56645 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.26■□□□□ 0.03
PER3P56645 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PER3P56645 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.26■□□□□ 0.03
PER3P56645 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.26■□□□□ 0.03
PER3P56645 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.26■□□□□ 0.03
PER3P56645 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.26■□□□□ 0.03
PER3P56645 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.26■□□□□ 0.03
PER3P56645 AP001059.3-201ENST00000619053 235 ntBASIC15.26■□□□□ 0.03
PER3P56645 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PER3P56645 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PER3P56645 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.26■□□□□ 0.03
PER3P56645 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PER3P56645 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 AL603756.1-201ENST00000606511 2163 ntBASIC15.26■□□□□ 0.03
PER3P56645 AC132872.4-202ENST00000622924 2756 ntBASIC15.26■□□□□ 0.03
PER3P56645 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
PER3P56645 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.26■□□□□ 0.03
PER3P56645 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PER3P56645 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.26■□□□□ 0.03
PER3P56645 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PER3P56645 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PER3P56645 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.25■□□□□ 0.03
PER3P56645 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.25■□□□□ 0.03
PER3P56645 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PER3P56645 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.25■□□□□ 0.03
PER3P56645 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.25■□□□□ 0.03
PER3P56645 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.25■□□□□ 0.03
PER3P56645 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.25■□□□□ 0.03
PER3P56645 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.25■□□□□ 0.03
PER3P56645 AC002472.2-201ENST00000442739 958 ntBASIC15.25■□□□□ 0.03
PER3P56645 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.25■□□□□ 0.03
PER3P56645 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 AC125807.1-201ENST00000483097 614 ntBASIC15.25■□□□□ 0.03
PER3P56645 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 IGHV3-42-201ENST00000520410 361 ntBASIC15.25■□□□□ 0.03
PER3P56645 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PER3P56645 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.25■□□□□ 0.03
PER3P56645 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.25■□□□□ 0.03
PER3P56645 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.25■□□□□ 0.03
PER3P56645 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 PKD1P5-201ENST00000532415 10291 ntBASIC15.25■□□□□ 0.03
PER3P56645 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PER3P56645 AC133963.1-201ENST00000504166 1679 ntBASIC15.25■□□□□ 0.03
PER3P56645 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.25■□□□□ 0.03
PER3P56645 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.25■□□□□ 0.03
PER3P56645 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PER3P56645 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.25■□□□□ 0.03
PER3P56645 AC092919.2-201ENST00000623631 1645 ntBASIC15.25■□□□□ 0.03
PER3P56645 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
PER3P56645 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.24■□□□□ 0.03
PER3P56645 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
PER3P56645 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PER3P56645 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.24■□□□□ 0.03
PER3P56645 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms