Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SNCAP37840 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.57□□□□□ -0.24
SNCAP37840 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 AC023157.3-201ENST00000619086 2088 ntBASIC13.57□□□□□ -0.24
SNCAP37840 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.57□□□□□ -0.24
SNCAP37840 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.57□□□□□ -0.24
SNCAP37840 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNCAP37840 AC016734.2-201ENST00000624325 1377 ntBASIC13.57□□□□□ -0.24
SNCAP37840 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCAP37840 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCAP37840 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCAP37840 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.56□□□□□ -0.24
SNCAP37840 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
SNCAP37840 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SNCAP37840 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCAP37840 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCAP37840 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SNCAP37840 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 SNX18-202ENST00000343017 3140 ntBASIC13.56□□□□□ -0.24
SNCAP37840 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCAP37840 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCAP37840 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCAP37840 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
SNCAP37840 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.56□□□□□ -0.24
SNCAP37840 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SNCAP37840 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.56□□□□□ -0.24
SNCAP37840 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.56□□□□□ -0.24
SNCAP37840 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.56□□□□□ -0.24
SNCAP37840 AC005332.1-201ENST00000577698 1310 ntBASIC13.56□□□□□ -0.24
SNCAP37840 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 AP005117.1-202ENST00000581724 1908 ntBASIC13.56□□□□□ -0.24
SNCAP37840 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCAP37840 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SNCAP37840 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNCAP37840 MYO15B-237ENST00000642007 4893 ntBASIC13.56□□□□□ -0.24
SNCAP37840 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SNCAP37840 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SNCAP37840 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.55□□□□□ -0.24
SNCAP37840 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SNCAP37840 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SNCAP37840 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.55□□□□□ -0.24
SNCAP37840 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SNCAP37840 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SNCAP37840 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 INTS4P1-201ENST00000438455 1935 ntBASIC13.55□□□□□ -0.24
SNCAP37840 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.55□□□□□ -0.24
SNCAP37840 PMPCAP1-201ENST00000508114 1576 ntBASIC13.55□□□□□ -0.24
SNCAP37840 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.55□□□□□ -0.24
SNCAP37840 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SNCAP37840 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.55□□□□□ -0.24
SNCAP37840 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.55□□□□□ -0.24
SNCAP37840 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 AL031133.1-201ENST00000406807 723 ntBASIC13.55□□□□□ -0.24
SNCAP37840 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SNCAP37840 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
SNCAP37840 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 KRT17P6-201ENST00000453795 1220 ntBASIC13.55□□□□□ -0.24
SNCAP37840 AC091607.1-201ENST00000490318 1060 ntBASIC13.55□□□□□ -0.24
SNCAP37840 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.55□□□□□ -0.24
SNCAP37840 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.55□□□□□ -0.24
SNCAP37840 AL049597.2-201ENST00000565575 961 ntBASIC13.55□□□□□ -0.24
SNCAP37840 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
SNCAP37840 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SNCAP37840 PPT1-215ENST00000641471 2368 ntBASIC13.55□□□□□ -0.24
SNCAP37840 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms