Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
USP6P35125 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.8■■□□□ 1.08
USP6P35125 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.79■■□□□ 1.08
USP6P35125 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.79■■□□□ 1.08
USP6P35125 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.79■■□□□ 1.08
USP6P35125 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC21.79■■□□□ 1.08
USP6P35125 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.79■■□□□ 1.08
USP6P35125 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.79■■□□□ 1.08
USP6P35125 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 REXO1L8P-201ENST00000604378 1897 ntBASIC21.79■■□□□ 1.08
USP6P35125 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.79■■□□□ 1.08
USP6P35125 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.79■■□□□ 1.08
USP6P35125 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC21.79■■□□□ 1.08
USP6P35125 AC092658.1-201ENST00000505836 891 ntBASIC21.79■■□□□ 1.08
USP6P35125 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.79■■□□□ 1.08
USP6P35125 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.79■■□□□ 1.08
USP6P35125 HNRNPUP1-201ENST00000554987 333 ntBASIC21.79■■□□□ 1.08
USP6P35125 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC21.79■■□□□ 1.08
USP6P35125 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.79■■□□□ 1.08
USP6P35125 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.79■■□□□ 1.08
USP6P35125 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
USP6P35125 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
USP6P35125 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
USP6P35125 ZBTB45P2-201ENST00000452245 1531 ntBASIC21.78■■□□□ 1.08
USP6P35125 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
USP6P35125 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 TOMM22P5-201ENST00000416399 439 ntBASIC21.78■■□□□ 1.08
USP6P35125 RPL28-204ENST00000431533 590 ntTSL 2 BASIC21.78■■□□□ 1.08
USP6P35125 FAM86LP-201ENST00000478302 853 ntBASIC21.78■■□□□ 1.08
USP6P35125 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.78■■□□□ 1.08
USP6P35125 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.78■■□□□ 1.08
USP6P35125 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC21.78■■□□□ 1.08
USP6P35125 BTNL10-201ENST00000595971 695 ntBASIC21.78■■□□□ 1.08
USP6P35125 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.78■■□□□ 1.08
USP6P35125 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.78■■□□□ 1.08
USP6P35125 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC21.78■■□□□ 1.08
USP6P35125 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
USP6P35125 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
USP6P35125 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.77■■□□□ 1.08
USP6P35125 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6P35125 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.77■■□□□ 1.08
USP6P35125 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
USP6P35125 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6P35125 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
USP6P35125 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6P35125 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6P35125 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
USP6P35125 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6P35125 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
USP6P35125 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6P35125 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.77■■□□□ 1.08
USP6P35125 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.77■■□□□ 1.08
USP6P35125 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6P35125 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.77■■□□□ 1.08
USP6P35125 AC104989.1-201ENST00000519711 778 ntBASIC21.77■■□□□ 1.08
USP6P35125 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.77■■□□□ 1.08
USP6P35125 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.77■■□□□ 1.08
USP6P35125 CU634019.7-201ENST00000624153 1185 ntBASIC21.77■■□□□ 1.08
USP6P35125 FP236241.2-201ENST00000624906 1185 ntBASIC21.77■■□□□ 1.08
USP6P35125 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6P35125 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6P35125 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
USP6P35125 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
USP6P35125 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC21.77■■□□□ 1.08
USP6P35125 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.76■■□□□ 1.07
USP6P35125 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 PDIA3P1-201ENST00000471856 1510 ntBASIC21.76■■□□□ 1.07
USP6P35125 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
USP6P35125 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms