Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO1P25800 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO1P25800 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 AC004877.2-201ENST00000623941 599 ntBASIC13.79□□□□□ -0.2
LMO1P25800 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 IL9RP2-201ENST00000423948 1312 ntBASIC13.79□□□□□ -0.2
LMO1P25800 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 AC079328.2-201ENST00000561241 3354 ntBASIC13.79□□□□□ -0.2
LMO1P25800 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LMO1P25800 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO1P25800 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LMO1P25800 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
LMO1P25800 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO1P25800 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
LMO1P25800 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO1P25800 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.78□□□□□ -0.2
LMO1P25800 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO1P25800 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO1P25800 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO1P25800 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LMO1P25800 BX640515.1-201ENST00000617215 977 ntBASIC13.78□□□□□ -0.2
LMO1P25800 AC023511.2-201ENST00000618803 211 ntBASIC13.78□□□□□ -0.2
LMO1P25800 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 AC025580.3-201ENST00000617932 1424 ntBASIC13.78□□□□□ -0.2
LMO1P25800 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LMO1P25800 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO1P25800 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO1P25800 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.78□□□□□ -0.2
LMO1P25800 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO1P25800 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO1P25800 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
LMO1P25800 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LMO1P25800 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LMO1P25800 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.77□□□□□ -0.2
LMO1P25800 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
LMO1P25800 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
LMO1P25800 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
LMO1P25800 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.77□□□□□ -0.21
LMO1P25800 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LMO1P25800 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
LMO1P25800 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LMO1P25800 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LMO1P25800 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 ZNF259P1-201ENST00000407656 1365 ntBASIC13.77□□□□□ -0.21
LMO1P25800 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LMO1P25800 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.77□□□□□ -0.21
LMO1P25800 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.77□□□□□ -0.21
LMO1P25800 KRT18P2-201ENST00000447938 1258 ntBASIC13.77□□□□□ -0.21
LMO1P25800 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LMO1P25800 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.77□□□□□ -0.21
LMO1P25800 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms