Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ITGA6P23229 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.05■□□□□ 0.8
ITGA6P23229 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.05■□□□□ 0.8
ITGA6P23229 AC114501.2-201ENST00000439631 535 ntBASIC20.05■□□□□ 0.8
ITGA6P23229 GAPDHP21-201ENST00000450301 1010 ntBASIC20.05■□□□□ 0.8
ITGA6P23229 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.05■□□□□ 0.8
ITGA6P23229 AL596325.1-201ENST00000563991 1082 ntBASIC20.05■□□□□ 0.8
ITGA6P23229 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.05■□□□□ 0.8
ITGA6P23229 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA6P23229 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.05■□□□□ 0.8
ITGA6P23229 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.05■□□□□ 0.8
ITGA6P23229 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA6P23229 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
ITGA6P23229 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ITGA6P23229 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA6P23229 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA6P23229 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA6P23229 AL592424.1-201ENST00000563624 1536 ntBASIC20.05■□□□□ 0.8
ITGA6P23229 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.05■□□□□ 0.8
ITGA6P23229 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA6P23229 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.05■□□□□ 0.8
ITGA6P23229 AC011676.5-201ENST00000624864 2660 ntBASIC20.05■□□□□ 0.8
ITGA6P23229 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA6P23229 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ITGA6P23229 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA6P23229 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA6P23229 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ITGA6P23229 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.04■□□□□ 0.8
ITGA6P23229 ALOX12P2-203ENST00000570921 1945 ntBASIC20.04■□□□□ 0.8
ITGA6P23229 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ITGA6P23229 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.04■□□□□ 0.8
ITGA6P23229 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.04■□□□□ 0.8
ITGA6P23229 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
ITGA6P23229 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.04■□□□□ 0.8
ITGA6P23229 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ITGA6P23229 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ITGA6P23229 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.04■□□□□ 0.8
ITGA6P23229 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.04■□□□□ 0.8
ITGA6P23229 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGA6P23229 AC009053.2-201ENST00000563701 2365 ntBASIC20.03■□□□□ 0.8
ITGA6P23229 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ITGA6P23229 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.03■□□□□ 0.8
ITGA6P23229 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 AGGF1P2-201ENST00000426656 2106 ntBASIC20.03■□□□□ 0.8
ITGA6P23229 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.03■□□□□ 0.8
ITGA6P23229 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ITGA6P23229 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.03■□□□□ 0.8
ITGA6P23229 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.03■□□□□ 0.8
ITGA6P23229 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.03■□□□□ 0.8
ITGA6P23229 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.03■□□□□ 0.8
ITGA6P23229 RN7SL692P-201ENST00000464677 288 ntBASIC20.03■□□□□ 0.8
ITGA6P23229 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.03■□□□□ 0.8
ITGA6P23229 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
ITGA6P23229 TP53TG3HP-202ENST00000569755 579 ntBASIC20.03■□□□□ 0.8
ITGA6P23229 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.03■□□□□ 0.8
ITGA6P23229 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.03■□□□□ 0.8
ITGA6P23229 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.03■□□□□ 0.8
ITGA6P23229 MIR6069-201ENST00000620069 79 ntBASIC20.03■□□□□ 0.8
ITGA6P23229 AL109936.8-201ENST00000641772 604 ntBASIC20.03■□□□□ 0.8
ITGA6P23229 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ITGA6P23229 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.03■□□□□ 0.8
ITGA6P23229 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ITGA6P23229 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.03■□□□□ 0.8
ITGA6P23229 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGA6P23229 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ITGA6P23229 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGA6P23229 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ITGA6P23229 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.02■□□□□ 0.8
ITGA6P23229 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.02■□□□□ 0.8
ITGA6P23229 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.02■□□□□ 0.8
ITGA6P23229 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGA6P23229 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGA6P23229 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGA6P23229 SPDYE19P-201ENST00000338590 713 ntBASIC20.02■□□□□ 0.8
ITGA6P23229 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms