Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 AC073621.1-201ENST00000392730 636 ntBASIC15.28■□□□□ 0.04
TNFRSF1BP20333 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 KRT18P27-201ENST00000427733 1299 ntBASIC15.28■□□□□ 0.04
TNFRSF1BP20333 SAPCD2P3-201ENST00000455031 850 ntBASIC15.28■□□□□ 0.04
TNFRSF1BP20333 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 AP001350.2-201ENST00000625104 1094 ntBASIC15.28■□□□□ 0.04
TNFRSF1BP20333 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 AC069224.1-201ENST00000566372 1715 ntBASIC15.28■□□□□ 0.04
TNFRSF1BP20333 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFRSF1BP20333 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 AC013268.4-201ENST00000637413 2228 ntBASIC15.27■□□□□ 0.04
TNFRSF1BP20333 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 AC005622.1-201ENST00000636801 1703 ntBASIC15.27■□□□□ 0.04
TNFRSF1BP20333 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 AC005412.3-201ENST00000580309 715 ntBASIC15.27■□□□□ 0.04
TNFRSF1BP20333 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFRSF1BP20333 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFRSF1BP20333 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms