Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.85□□□□□ -0.03
CLUP10909 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 AKR1C7P-201ENST00000305623 895 ntBASIC14.85□□□□□ -0.03
CLUP10909 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.85□□□□□ -0.03
CLUP10909 TSPY19P-201ENST00000418461 509 ntBASIC14.85□□□□□ -0.03
CLUP10909 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.85□□□□□ -0.03
CLUP10909 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.85□□□□□ -0.03
CLUP10909 TSPY18P-201ENST00000441642 509 ntBASIC14.85□□□□□ -0.03
CLUP10909 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.85□□□□□ -0.03
CLUP10909 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.85□□□□□ -0.03
CLUP10909 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.85□□□□□ -0.03
CLUP10909 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.85□□□□□ -0.03
CLUP10909 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CLUP10909 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.85□□□□□ -0.03
CLUP10909 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.85□□□□□ -0.03
CLUP10909 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 AL805961.1-202ENST00000641562 540 ntBASIC14.85□□□□□ -0.03
CLUP10909 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CLUP10909 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLUP10909 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.85□□□□□ -0.03
CLUP10909 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.85□□□□□ -0.03
CLUP10909 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 DBET-201ENST00000630918 3363 ntBASIC14.85□□□□□ -0.03
CLUP10909 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CLUP10909 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLUP10909 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLUP10909 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CLUP10909 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CLUP10909 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLUP10909 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.84□□□□□ -0.03
CLUP10909 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.84□□□□□ -0.03
CLUP10909 AC091304.2-201ENST00000564639 760 ntBASIC14.84□□□□□ -0.03
CLUP10909 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.84□□□□□ -0.03
CLUP10909 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.84□□□□□ -0.03
CLUP10909 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.84□□□□□ -0.03
CLUP10909 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.84□□□□□ -0.03
CLUP10909 REXO1L6P-202ENST00000619970 1078 ntBASIC14.84□□□□□ -0.03
CLUP10909 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CLUP10909 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CLUP10909 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.84□□□□□ -0.03
CLUP10909 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLUP10909 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLUP10909 AC144831.1-201ENST00000573312 2656 ntBASIC14.84□□□□□ -0.03
CLUP10909 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
CLUP10909 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
CLUP10909 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CLUP10909 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.84□□□□□ -0.03
CLUP10909 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLUP10909 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.84□□□□□ -0.03
CLUP10909 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms