Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
UBCP0CG48 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.45□□□□□ -0.1
UBCP0CG48 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.45□□□□□ -0.1
UBCP0CG48 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.45□□□□□ -0.1
UBCP0CG48 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.45□□□□□ -0.1
UBCP0CG48 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.45□□□□□ -0.1
UBCP0CG48 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 SAPCD2P3-201ENST00000455031 850 ntBASIC14.45□□□□□ -0.1
UBCP0CG48 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 RPS15P9-201ENST00000494093 319 ntBASIC14.45□□□□□ -0.1
UBCP0CG48 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.45□□□□□ -0.1
UBCP0CG48 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.45□□□□□ -0.1
UBCP0CG48 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
UBCP0CG48 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.45□□□□□ -0.1
UBCP0CG48 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.45□□□□□ -0.1
UBCP0CG48 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.45□□□□□ -0.1
UBCP0CG48 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.45□□□□□ -0.1
UBCP0CG48 AC107918.4-202ENST00000641623 219 ntBASIC14.45□□□□□ -0.1
UBCP0CG48 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.45□□□□□ -0.1
UBCP0CG48 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
UBCP0CG48 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.45□□□□□ -0.1
UBCP0CG48 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
UBCP0CG48 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.44□□□□□ -0.1
UBCP0CG48 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.44□□□□□ -0.1
UBCP0CG48 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBCP0CG48 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
UBCP0CG48 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
UBCP0CG48 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBCP0CG48 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.44□□□□□ -0.1
UBCP0CG48 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBCP0CG48 REXO1L8P-201ENST00000604378 1897 ntBASIC14.44□□□□□ -0.1
UBCP0CG48 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
UBCP0CG48 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.44□□□□□ -0.1
UBCP0CG48 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBCP0CG48 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBCP0CG48 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBCP0CG48 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
UBCP0CG48 TSPY19P-201ENST00000418461 509 ntBASIC14.44□□□□□ -0.1
UBCP0CG48 TSPY18P-201ENST00000441642 509 ntBASIC14.44□□□□□ -0.1
UBCP0CG48 HCG4P8-203ENST00000443049 980 ntBASIC14.44□□□□□ -0.1
UBCP0CG48 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.44□□□□□ -0.1
UBCP0CG48 AL445228.2-201ENST00000605589 952 ntBASIC14.44□□□□□ -0.1
UBCP0CG48 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.44□□□□□ -0.1
UBCP0CG48 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBCP0CG48 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBCP0CG48 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBCP0CG48 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.44□□□□□ -0.1
UBCP0CG48 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.44□□□□□ -0.1
UBCP0CG48 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBCP0CG48 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.44□□□□□ -0.1
UBCP0CG48 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
UBCP0CG48 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.44□□□□□ -0.1
UBCP0CG48 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.44□□□□□ -0.1
UBCP0CG48 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.44□□□□□ -0.1
UBCP0CG48 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBCP0CG48 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.43□□□□□ -0.1
UBCP0CG48 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
UBCP0CG48 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
UBCP0CG48 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.43□□□□□ -0.1
UBCP0CG48 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UBCP0CG48 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.43□□□□□ -0.1
UBCP0CG48 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
UBCP0CG48 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.43□□□□□ -0.1
UBCP0CG48 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.43□□□□□ -0.1
UBCP0CG48 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
UBCP0CG48 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
UBCP0CG48 UPK3BP1-201ENST00000428678 509 ntBASIC14.43□□□□□ -0.1
UBCP0CG48 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.43□□□□□ -0.1
UBCP0CG48 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms