Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FREM3P0C091 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.87□□□□□ -0.03
FREM3P0C091 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FREM3P0C091 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.87□□□□□ -0.03
FREM3P0C091 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.87□□□□□ -0.03
FREM3P0C091 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.87□□□□□ -0.03
FREM3P0C091 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
FREM3P0C091 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 ME2P1-201ENST00000426028 1970 ntBASIC14.86□□□□□ -0.03
FREM3P0C091 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.86□□□□□ -0.03
FREM3P0C091 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.86□□□□□ -0.03
FREM3P0C091 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.86□□□□□ -0.03
FREM3P0C091 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.86□□□□□ -0.03
FREM3P0C091 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.86□□□□□ -0.03
FREM3P0C091 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 AC015911.4-201ENST00000588022 1070 ntBASIC14.86□□□□□ -0.03
FREM3P0C091 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
FREM3P0C091 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.86□□□□□ -0.03
FREM3P0C091 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.86□□□□□ -0.03
FREM3P0C091 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
FREM3P0C091 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
FREM3P0C091 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.86□□□□□ -0.03
FREM3P0C091 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
FREM3P0C091 TSSK5P-201ENST00000423978 907 ntBASIC14.86□□□□□ -0.03
FREM3P0C091 HLA-J-202ENST00000469281 1241 ntBASIC14.86□□□□□ -0.03
FREM3P0C091 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.86□□□□□ -0.03
FREM3P0C091 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
FREM3P0C091 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.86□□□□□ -0.03
FREM3P0C091 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.86□□□□□ -0.03
FREM3P0C091 SPTSSB-204ENST00000617024 1292 ntBASIC14.86□□□□□ -0.03
FREM3P0C091 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FREM3P0C091 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.85□□□□□ -0.03
FREM3P0C091 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.85□□□□□ -0.03
FREM3P0C091 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.85□□□□□ -0.03
FREM3P0C091 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.85□□□□□ -0.03
FREM3P0C091 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
FREM3P0C091 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.85□□□□□ -0.03
FREM3P0C091 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
FREM3P0C091 MRPS18AP1-201ENST00000414458 589 ntBASIC14.85□□□□□ -0.03
FREM3P0C091 MTND6P24-201ENST00000440466 518 ntBASIC14.85□□□□□ -0.03
FREM3P0C091 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.85□□□□□ -0.03
FREM3P0C091 AC025678.2-201ENST00000562061 970 ntBASIC14.85□□□□□ -0.03
FREM3P0C091 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
FREM3P0C091 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.85□□□□□ -0.03
FREM3P0C091 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.85□□□□□ -0.03
FREM3P0C091 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.85□□□□□ -0.03
FREM3P0C091 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM3P0C091 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FREM3P0C091 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM3P0C091 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
FREM3P0C091 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.84□□□□□ -0.03
FREM3P0C091 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.84□□□□□ -0.03
FREM3P0C091 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
FREM3P0C091 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.84□□□□□ -0.03
FREM3P0C091 AC021097.1-201ENST00000607902 574 ntBASIC14.84□□□□□ -0.03
FREM3P0C091 MTHFR-217ENST00000641820 1569 ntBASIC14.84□□□□□ -0.03
FREM3P0C091 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.84□□□□□ -0.03
FREM3P0C091 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.84□□□□□ -0.03
FREM3P0C091 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM3P0C091 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.84□□□□□ -0.03
FREM3P0C091 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM3P0C091 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM3P0C091 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms