Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HOXC6P09630 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HOXC6P09630 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC6P09630 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC6P09630 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC6P09630 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXC6P09630 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC6P09630 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
HOXC6P09630 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXC6P09630 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC6P09630 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC6P09630 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXC6P09630 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.35■□□□□ 0.53
HOXC6P09630 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HOXC6P09630 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXC6P09630 SNX29P1-201ENST00000548357 1007 ntBASIC18.35■□□□□ 0.53
HOXC6P09630 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXC6P09630 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXC6P09630 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXC6P09630 AC133552.6-201ENST00000613406 534 ntBASIC18.35■□□□□ 0.53
HOXC6P09630 RPSAP52-203ENST00000622976 1023 ntBASIC18.35■□□□□ 0.53
HOXC6P09630 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
HOXC6P09630 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
HOXC6P09630 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
HOXC6P09630 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
HOXC6P09630 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HOXC6P09630 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC6P09630 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
HOXC6P09630 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
HOXC6P09630 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXC6P09630 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.34■□□□□ 0.53
HOXC6P09630 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.34■□□□□ 0.53
HOXC6P09630 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.34■□□□□ 0.53
HOXC6P09630 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.34■□□□□ 0.53
HOXC6P09630 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.34■□□□□ 0.53
HOXC6P09630 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.34■□□□□ 0.53
HOXC6P09630 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.34■□□□□ 0.53
HOXC6P09630 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.34■□□□□ 0.53
HOXC6P09630 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 AL391069.4-201ENST00000609583 481 ntBASIC18.34■□□□□ 0.53
HOXC6P09630 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HOXC6P09630 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HOXC6P09630 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HOXC6P09630 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC6P09630 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC6P09630 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
HOXC6P09630 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.33■□□□□ 0.53
HOXC6P09630 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
HOXC6P09630 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC6P09630 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC6P09630 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC6P09630 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.33■□□□□ 0.53
HOXC6P09630 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC6P09630 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC6P09630 AC012313.1-201ENST00000593393 3059 ntBASIC18.33■□□□□ 0.53
HOXC6P09630 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HOXC6P09630 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.33■□□□□ 0.52
HOXC6P09630 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
HOXC6P09630 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXC6P09630 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.33■□□□□ 0.52
HOXC6P09630 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.33■□□□□ 0.52
HOXC6P09630 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.33■□□□□ 0.52
HOXC6P09630 MIR4321-201ENST00000592276 80 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms