Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AL596087.1-201ENST00000400979 1969 ntBASIC19.62■□□□□ 0.73
CHGBP05060 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.62■□□□□ 0.73
CHGBP05060 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHGBP05060 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHGBP05060 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHGBP05060 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHGBP05060 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHGBP05060 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.62■□□□□ 0.73
CHGBP05060 AL136982.4-201ENST00000437689 1740 ntBASIC19.62■□□□□ 0.73
CHGBP05060 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.61■□□□□ 0.73
CHGBP05060 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHGBP05060 AC018695.7-201ENST00000624587 2492 ntBASIC19.61■□□□□ 0.73
CHGBP05060 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CHGBP05060 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.61■□□□□ 0.73
CHGBP05060 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.61■□□□□ 0.73
CHGBP05060 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 AC025678.2-201ENST00000562061 970 ntBASIC19.61■□□□□ 0.73
CHGBP05060 AL355385.1-201ENST00000606123 409 ntBASIC19.61■□□□□ 0.73
CHGBP05060 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.61■□□□□ 0.73
CHGBP05060 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.61■□□□□ 0.73
CHGBP05060 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CHGBP05060 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.61■□□□□ 0.73
CHGBP05060 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHGBP05060 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHGBP05060 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHGBP05060 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHGBP05060 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.6■□□□□ 0.73
CHGBP05060 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.6■□□□□ 0.73
CHGBP05060 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHGBP05060 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.6■□□□□ 0.73
CHGBP05060 FO538757.1-201ENST00000623083 1397 ntBASIC19.6■□□□□ 0.73
CHGBP05060 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CHGBP05060 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHGBP05060 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHGBP05060 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHGBP05060 AC092580.3-201ENST00000430932 139 ntBASIC19.6■□□□□ 0.73
CHGBP05060 HMGN1P19-201ENST00000436976 333 ntBASIC19.6■□□□□ 0.73
CHGBP05060 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.6■□□□□ 0.73
CHGBP05060 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.6■□□□□ 0.73
CHGBP05060 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.6■□□□□ 0.73
CHGBP05060 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHGBP05060 AL133215.2-201ENST00000609242 977 ntBASIC19.6■□□□□ 0.73
CHGBP05060 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.6■□□□□ 0.73
CHGBP05060 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHGBP05060 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHGBP05060 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHGBP05060 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHGBP05060 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.6■□□□□ 0.73
CHGBP05060 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.6■□□□□ 0.73
CHGBP05060 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHGBP05060 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CHGBP05060 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.6■□□□□ 0.73
CHGBP05060 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHGBP05060 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.6■□□□□ 0.73
CHGBP05060 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHGBP05060 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.59■□□□□ 0.73
CHGBP05060 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.59■□□□□ 0.73
CHGBP05060 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CHGBP05060 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHGBP05060 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHGBP05060 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHGBP05060 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.59■□□□□ 0.73
CHGBP05060 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.59■□□□□ 0.73
CHGBP05060 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHGBP05060 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHGBP05060 TREML5P-201ENST00000421694 576 ntBASIC19.59■□□□□ 0.73
CHGBP05060 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.59■□□□□ 0.73
CHGBP05060 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.59■□□□□ 0.73
CHGBP05060 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.59■□□□□ 0.73
CHGBP05060 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.59■□□□□ 0.73
CHGBP05060 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CHGBP05060 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHGBP05060 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHGBP05060 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHGBP05060 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.59■□□□□ 0.73
CHGBP05060 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
CHGBP05060 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHGBP05060 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.59■□□□□ 0.73
CHGBP05060 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHGBP05060 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHGBP05060 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.58■□□□□ 0.73
CHGBP05060 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.58■□□□□ 0.73
CHGBP05060 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.58■□□□□ 0.73
CHGBP05060 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHGBP05060 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms