Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LMNAP02545 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 SPDYE7P-202ENST00000420373 878 ntBASIC17.21■□□□□ 0.35
LMNAP02545 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LMNAP02545 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.21■□□□□ 0.35
LMNAP02545 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.21■□□□□ 0.35
LMNAP02545 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.21■□□□□ 0.35
LMNAP02545 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 AC068418.2-201ENST00000577309 3703 ntBASIC17.21■□□□□ 0.35
LMNAP02545 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LMNAP02545 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.21■□□□□ 0.35
LMNAP02545 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.21■□□□□ 0.35
LMNAP02545 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.21■□□□□ 0.34
LMNAP02545 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LMNAP02545 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LMNAP02545 AC006449.5-201ENST00000610658 2098 ntBASIC17.2■□□□□ 0.34
LMNAP02545 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
LMNAP02545 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.2■□□□□ 0.34
LMNAP02545 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.2■□□□□ 0.34
LMNAP02545 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.2■□□□□ 0.34
LMNAP02545 AC007950.2-201ENST00000615045 2347 ntBASIC17.2■□□□□ 0.34
LMNAP02545 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.2■□□□□ 0.34
LMNAP02545 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LMNAP02545 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LMNAP02545 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LMNAP02545 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 AC069120.2-201ENST00000524091 540 ntBASIC17.2■□□□□ 0.34
LMNAP02545 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LMNAP02545 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.2■□□□□ 0.34
LMNAP02545 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.2■□□□□ 0.34
LMNAP02545 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.2■□□□□ 0.34
LMNAP02545 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.2■□□□□ 0.34
LMNAP02545 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 AC009118.2-201ENST00000613275 655 ntBASIC17.2■□□□□ 0.34
LMNAP02545 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LMNAP02545 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LMNAP02545 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 LINC00304-203ENST00000565008 1864 ntBASIC17.2■□□□□ 0.34
LMNAP02545 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.2■□□□□ 0.34
LMNAP02545 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LMNAP02545 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMNAP02545 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LMNAP02545 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LMNAP02545 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.19■□□□□ 0.34
LMNAP02545 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LMNAP02545 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.19■□□□□ 0.34
LMNAP02545 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.19■□□□□ 0.34
LMNAP02545 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 GPS2P2-201ENST00000430745 888 ntBASIC17.19■□□□□ 0.34
LMNAP02545 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.19■□□□□ 0.34
LMNAP02545 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.19■□□□□ 0.34
LMNAP02545 AC097493.3-201ENST00000509725 367 ntBASIC17.19■□□□□ 0.34
LMNAP02545 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.19■□□□□ 0.34
LMNAP02545 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.19■□□□□ 0.34
LMNAP02545 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.19■□□□□ 0.34
LMNAP02545 AC099522.2-201ENST00000607001 744 ntBASIC17.19■□□□□ 0.34
LMNAP02545 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.19■□□□□ 0.34
LMNAP02545 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms