Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT4O95628 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.62□□□□□ -0.07
CNOT4O95628 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT4O95628 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT4O95628 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT4O95628 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CNOT4O95628 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT4O95628 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT4O95628 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT4O95628 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 AC016027.1-202ENST00000607927 1699 ntBASIC14.61□□□□□ -0.07
CNOT4O95628 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 AL592309.1-201ENST00000443127 649 ntBASIC14.61□□□□□ -0.07
CNOT4O95628 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.61□□□□□ -0.07
CNOT4O95628 AC023141.5-201ENST00000458585 616 ntBASIC14.61□□□□□ -0.07
CNOT4O95628 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.61□□□□□ -0.07
CNOT4O95628 AC093512.1-201ENST00000617969 520 ntBASIC14.61□□□□□ -0.07
CNOT4O95628 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.61□□□□□ -0.07
CNOT4O95628 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.61□□□□□ -0.07
CNOT4O95628 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT4O95628 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
CNOT4O95628 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.61□□□□□ -0.07
CNOT4O95628 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT4O95628 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.6□□□□□ -0.07
CNOT4O95628 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 AC105020.1-201ENST00000435356 2205 ntBASIC14.6□□□□□ -0.07
CNOT4O95628 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.6□□□□□ -0.07
CNOT4O95628 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.6□□□□□ -0.07
CNOT4O95628 AL139400.1-201ENST00000366220 510 ntBASIC14.6□□□□□ -0.07
CNOT4O95628 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CNOT4O95628 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 AL627223.1-201ENST00000416693 442 ntBASIC14.6□□□□□ -0.07
CNOT4O95628 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.6□□□□□ -0.07
CNOT4O95628 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.6□□□□□ -0.07
CNOT4O95628 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.6□□□□□ -0.07
CNOT4O95628 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.6□□□□□ -0.07
CNOT4O95628 LINC01225-203ENST00000563550 1244 ntBASIC14.6□□□□□ -0.07
CNOT4O95628 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 AC073389.1-201ENST00000595595 795 ntBASIC14.6□□□□□ -0.07
CNOT4O95628 AC009093.7-201ENST00000623853 1223 ntBASIC14.6□□□□□ -0.07
CNOT4O95628 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CNOT4O95628 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.6□□□□□ -0.07
CNOT4O95628 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms