Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 MMP23A-201ENST00000234610 1017 ntBASIC11.97□□□□□ -0.49
TNFRSF6BO95407 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 MIR648-201ENST00000385046 94 ntBASIC11.97□□□□□ -0.49
TNFRSF6BO95407 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 AC005336.2-201ENST00000593183 939 ntBASIC11.97□□□□□ -0.49
TNFRSF6BO95407 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.97□□□□□ -0.49
TNFRSF6BO95407 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.97□□□□□ -0.49
TNFRSF6BO95407 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 AC136621.1-201ENST00000624017 2304 ntBASIC11.97□□□□□ -0.49
TNFRSF6BO95407 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.97□□□□□ -0.49
TNFRSF6BO95407 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 SIGLEC30P-201ENST00000455569 941 ntBASIC11.96□□□□□ -0.49
TNFRSF6BO95407 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 RNF126P1-202ENST00000569893 925 ntBASIC11.96□□□□□ -0.49
TNFRSF6BO95407 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
TNFRSF6BO95407 AP003680.1-201ENST00000598970 3660 ntBASIC11.96□□□□□ -0.5
TNFRSF6BO95407 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TNFRSF6BO95407 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms