Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
ALX3O95076 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.6□□□□□ -0.07
ALX3O95076 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
ALX3O95076 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.6□□□□□ -0.07
ALX3O95076 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ALX3O95076 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ALX3O95076 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.59□□□□□ -0.07
ALX3O95076 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ALX3O95076 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ALX3O95076 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.59□□□□□ -0.07
ALX3O95076 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ALX3O95076 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.59□□□□□ -0.07
ALX3O95076 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ALX3O95076 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.59□□□□□ -0.07
ALX3O95076 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.59□□□□□ -0.07
ALX3O95076 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.59□□□□□ -0.07
ALX3O95076 AP000347.1-202ENST00000435868 847 ntBASIC14.59□□□□□ -0.07
ALX3O95076 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.59□□□□□ -0.07
ALX3O95076 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.59□□□□□ -0.07
ALX3O95076 AL353135.1-201ENST00000606729 504 ntBASIC14.59□□□□□ -0.07
ALX3O95076 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.59□□□□□ -0.07
ALX3O95076 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
ALX3O95076 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 AL590787.1-201ENST00000568856 1315 ntBASIC14.59□□□□□ -0.07
ALX3O95076 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.59□□□□□ -0.07
ALX3O95076 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ALX3O95076 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ALX3O95076 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.59□□□□□ -0.07
ALX3O95076 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
ALX3O95076 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ALX3O95076 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.58□□□□□ -0.07
ALX3O95076 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ALX3O95076 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ALX3O95076 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ALX3O95076 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ALX3O95076 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.58□□□□□ -0.07
ALX3O95076 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.58□□□□□ -0.07
ALX3O95076 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ALX3O95076 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.58□□□□□ -0.08
ALX3O95076 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ALX3O95076 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.58□□□□□ -0.08
ALX3O95076 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.58□□□□□ -0.08
ALX3O95076 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
ALX3O95076 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.58□□□□□ -0.08
ALX3O95076 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.58□□□□□ -0.08
ALX3O95076 KRT16P4-201ENST00000453883 522 ntBASIC14.58□□□□□ -0.08
ALX3O95076 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.58□□□□□ -0.08
ALX3O95076 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.58□□□□□ -0.08
ALX3O95076 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.58□□□□□ -0.08
ALX3O95076 NPAP1P7-201ENST00000613027 823 ntBASIC14.58□□□□□ -0.08
ALX3O95076 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ALX3O95076 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.58□□□□□ -0.08
ALX3O95076 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ALX3O95076 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms