Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.02□□□□□ -0.17
SDCBPO00560 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SDCBPO00560 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.02□□□□□ -0.17
SDCBPO00560 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.02□□□□□ -0.17
SDCBPO00560 IFNL4P1-201ENST00000607083 540 ntBASIC14.02□□□□□ -0.17
SDCBPO00560 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.02□□□□□ -0.17
SDCBPO00560 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.02□□□□□ -0.17
SDCBPO00560 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SDCBPO00560 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SDCBPO00560 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
SDCBPO00560 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.02□□□□□ -0.17
SDCBPO00560 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDCBPO00560 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
SDCBPO00560 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.01□□□□□ -0.17
SDCBPO00560 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SDCBPO00560 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 AC073347.1-201ENST00000421633 2643 ntBASIC14.01□□□□□ -0.17
SDCBPO00560 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.01□□□□□ -0.17
SDCBPO00560 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SDCBPO00560 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.01□□□□□ -0.17
SDCBPO00560 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 AKR1C7P-201ENST00000305623 895 ntBASIC14.01□□□□□ -0.17
SDCBPO00560 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.01□□□□□ -0.17
SDCBPO00560 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.01□□□□□ -0.17
SDCBPO00560 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SDCBPO00560 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.01□□□□□ -0.17
SDCBPO00560 TERC-201ENST00000602385 541 ntBASIC14.01□□□□□ -0.17
SDCBPO00560 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SDCBPO00560 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDCBPO00560 AL512652.2-201ENST00000625156 1716 ntBASIC14.01□□□□□ -0.17
SDCBPO00560 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.01□□□□□ -0.17
SDCBPO00560 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.01□□□□□ -0.17
SDCBPO00560 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
SDCBPO00560 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14□□□□□ -0.17
SDCBPO00560 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14□□□□□ -0.17
SDCBPO00560 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDCBPO00560 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDCBPO00560 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14□□□□□ -0.17
SDCBPO00560 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDCBPO00560 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14□□□□□ -0.17
SDCBPO00560 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDCBPO00560 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SDCBPO00560 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDCBPO00560 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14□□□□□ -0.17
SDCBPO00560 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDCBPO00560 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDCBPO00560 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDCBPO00560 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SDCBPO00560 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SDCBPO00560 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14□□□□□ -0.17
SDCBPO00560 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14□□□□□ -0.17
SDCBPO00560 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SDCBPO00560 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms