Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK2O00526 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.18□□□□□ -0.3
UPK2O00526 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.18□□□□□ -0.3
UPK2O00526 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
UPK2O00526 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK2O00526 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 AL513480.1-201ENST00000451731 511 ntBASIC13.18□□□□□ -0.3
UPK2O00526 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 AC092910.1-201ENST00000482027 1129 ntBASIC13.18□□□□□ -0.3
UPK2O00526 AC108751.1-201ENST00000490852 363 ntBASIC13.18□□□□□ -0.3
UPK2O00526 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.18□□□□□ -0.3
UPK2O00526 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.18□□□□□ -0.3
UPK2O00526 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK2O00526 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.18□□□□□ -0.3
UPK2O00526 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.18□□□□□ -0.3
UPK2O00526 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
UPK2O00526 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
UPK2O00526 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.18□□□□□ -0.3
UPK2O00526 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
UPK2O00526 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK2O00526 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 AP005117.1-202ENST00000581724 1908 ntBASIC13.17□□□□□ -0.3
UPK2O00526 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.17□□□□□ -0.3
UPK2O00526 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UPK2O00526 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK2O00526 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK2O00526 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK2O00526 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK2O00526 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK2O00526 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 AC063926.3-201ENST00000624734 5658 ntBASIC13.17□□□□□ -0.3
UPK2O00526 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.17□□□□□ -0.3
UPK2O00526 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.17□□□□□ -0.3
UPK2O00526 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UPK2O00526 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK2O00526 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK2O00526 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
UPK2O00526 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
UPK2O00526 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UPK2O00526 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK2O00526 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
UPK2O00526 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms