Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.58■□□□□ 0.25
TBC1D3BA6NDS4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TBC1D3BA6NDS4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 GNAQP1-201ENST00000444815 1067 ntBASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 AC005622.1-201ENST00000636801 1703 ntBASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3BA6NDS4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 AP001094.4-201ENST00000579008 2176 ntBASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 AL139010.1-201ENST00000454878 894 ntBASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 AL512361.1-201ENST00000554200 418 ntBASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 AC044860.1-202ENST00000559481 777 ntBASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 TP53TG3HP-202ENST00000569755 579 ntBASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.57■□□□□ 0.24
TBC1D3BA6NDS4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3BA6NDS4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3BA6NDS4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.56■□□□□ 0.24
TBC1D3BA6NDS4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms