Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 TSPY19P-201ENST00000418461 509 ntBASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 HCG4-201ENST00000418983 998 ntBASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 LAGE3P1-201ENST00000425356 484 ntBASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 TSPY18P-201ENST00000441642 509 ntBASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC025062.2-201ENST00000605477 670 ntBASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 GGTLC5P-201ENST00000617623 998 ntBASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 REXO1L6P-202ENST00000619970 1078 ntBASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 REXO1L8P-201ENST00000604378 1897 ntBASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 LINC02447-202ENST00000501888 2146 ntBASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 ARMC10P1-201ENST00000313754 855 ntBASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC020765.3-201ENST00000613051 740 ntBASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV6-7A0A0A0MS04 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms