Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 MTND6P24-201ENST00000440466 518 ntBASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 AC024267.1-201ENST00000582320 895 ntBASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 CR383656.12-201ENST00000549567 513 ntBASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 AC004233.3-201ENST00000607794 1269 ntBASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 AL662799.1-202ENST00000614205 422 ntBASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 AL391256.1-201ENST00000443260 1855 ntBASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CSNK1G3Q9Y6M4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 PCDHB17P-201ENST00000539533 2393 ntBASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 AC092068.3-201ENST00000587894 2016 ntBASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms