Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 SPDYE11-202ENST00000450699 704 ntBASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 AC067863.1-201ENST00000494933 530 ntBASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 RNA5SP421-201ENST00000516864 134 ntBASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 SPDYE9P-201ENST00000570642 692 ntBASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 AC015911.4-201ENST00000588022 1070 ntBASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 SPDYE10P-202ENST00000612005 668 ntBASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 SPDYE8P-202ENST00000612377 668 ntBASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 INGX-202ENST00000489074 768 ntBASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 AC190387.1-201ENST00000551683 408 ntBASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 AL009183.1-201ENST00000603760 355 ntBASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHB1Q9Y5F3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB1Q9Y5F3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms