Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 AC243591.1-201ENST00000452967 1364 ntBASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 OR2I1P-209ENST00000641730 5365 ntBASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 ATP5G1P1-201ENST00000448724 379 ntBASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 SIGLEC30P-201ENST00000455569 941 ntBASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 AC009533.2-201ENST00000543664 586 ntBASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 MIR4497-201ENST00000583208 89 ntBASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 HYMAI.1-201ENST00000620949 238 ntBASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.49□□□□□ -0.25
RCL1Q9Y2P8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 PCGF3-213ENST00000620529 1899 ntBASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 AC004817.3-201ENST00000602957 2129 ntBASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 AC016027.1-202ENST00000607927 1699 ntBASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 SPDYE13P-201ENST00000445314 798 ntBASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 AC112907.2-201ENST00000448639 330 ntBASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 AC011467.2-201ENST00000598425 242 ntBASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 AC145285.6-201ENST00000604632 637 ntBASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 AC139887.4-201ENST00000607877 719 ntBASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms