Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 MIR346-201ENST00000362234 95 ntBASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 PIN1P1-201ENST00000412108 996 ntBASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 AC241585.1-201ENST00000433527 519 ntBASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 MIR3909-201ENST00000579518 119 ntBASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 SPDYE22P-201ENST00000582158 798 ntBASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 CYP2T1P-202ENST00000641596 2535 ntBASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDZRN3Q9UPQ7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 LINC00895-201ENST00000629028 1637 ntBASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 HCG4-201ENST00000418983 998 ntBASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDZRN3Q9UPQ7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 AC092580.3-201ENST00000430932 139 ntBASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 AC004890.2-204ENST00000481968 304 ntBASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 AL359881.2-201ENST00000602973 570 ntBASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PDZRN3Q9UPQ7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms