Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
EBF1Q9UH73 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
EBF1Q9UH73 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.72■□□□□ 0.27
EBF1Q9UH73 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.72■□□□□ 0.27
EBF1Q9UH73 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.72■□□□□ 0.27
EBF1Q9UH73 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.72■□□□□ 0.27
EBF1Q9UH73 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.72■□□□□ 0.27
EBF1Q9UH73 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.72■□□□□ 0.27
EBF1Q9UH73 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 MIR6752-201ENST00000618442 71 ntBASIC16.72■□□□□ 0.27
EBF1Q9UH73 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.72■□□□□ 0.27
EBF1Q9UH73 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.72■□□□□ 0.27
EBF1Q9UH73 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 PKD1P1-201ENST00000458669 6805 ntBASIC16.72■□□□□ 0.27
EBF1Q9UH73 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
EBF1Q9UH73 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.72■□□□□ 0.27
EBF1Q9UH73 AL138688.1-201ENST00000624851 1594 ntBASIC16.72■□□□□ 0.27
EBF1Q9UH73 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EBF1Q9UH73 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EBF1Q9UH73 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EBF1Q9UH73 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.71■□□□□ 0.27
EBF1Q9UH73 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
EBF1Q9UH73 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
EBF1Q9UH73 AC068418.2-201ENST00000577309 3703 ntBASIC16.71■□□□□ 0.27
EBF1Q9UH73 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EBF1Q9UH73 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EBF1Q9UH73 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EBF1Q9UH73 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 HLA-H-201ENST00000383620 1096 ntBASIC16.71■□□□□ 0.27
EBF1Q9UH73 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EBF1Q9UH73 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EBF1Q9UH73 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.71■□□□□ 0.27
EBF1Q9UH73 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
EBF1Q9UH73 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
EBF1Q9UH73 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.71■□□□□ 0.26
EBF1Q9UH73 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.7■□□□□ 0.26
EBF1Q9UH73 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EBF1Q9UH73 AC106886.4-201ENST00000623557 2502 ntBASIC16.7■□□□□ 0.26
EBF1Q9UH73 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms