Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 AC003669.1-201ENST00000334569 611 ntBASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 BX664615.1-201ENST00000443558 458 ntBASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 RN7SL606P-201ENST00000472779 293 ntBASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 RNF126P1-202ENST00000569893 925 ntBASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 RN7SL371P-201ENST00000578099 267 ntBASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 CICP4-201ENST00000447359 2812 ntBASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 MYO15B-237ENST00000642007 4893 ntBASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 AP003680.1-201ENST00000598970 3660 ntBASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 ATP5G1P1-201ENST00000448724 379 ntBASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 YBX1P2-201ENST00000489612 999 ntBASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 AC006449.6-201ENST00000612330 2296 ntBASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms