Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 AL136379.1-201ENST00000623471 2642 ntBASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
PCGF1Q9BSM1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.83□□□□□ -0.19
PCGF1Q9BSM1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PCGF1Q9BSM1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
PCGF1Q9BSM1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.83□□□□□ -0.19
PCGF1Q9BSM1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 AC026691.1-201ENST00000602502 2017 ntBASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 AL353732.1-201ENST00000569618 1459 ntBASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 AP006288.1-201ENST00000446065 395 ntBASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 ACTG1P14-201ENST00000446382 1122 ntBASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 AP002472.1-201ENST00000577490 586 ntBASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 TOP3BP1-201ENST00000420768 1380 ntBASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCGF1Q9BSM1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 AC005052.1-201ENST00000625181 2492 ntBASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 AC092068.3-201ENST00000587894 2016 ntBASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 AC005915.1-201ENST00000624912 2018 ntBASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 AC002056.1-201ENST00000395613 760 ntBASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 386.8 ms