Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.03■□□□□ -0
SNX18Q96RF0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.03■□□□□ -0
SNX18Q96RF0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.03■□□□□ -0
SNX18Q96RF0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.03■□□□□ -0
SNX18Q96RF0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.03■□□□□ -0
SNX18Q96RF0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.03■□□□□ -0
SNX18Q96RF0 AP001005.1-201ENST00000571755 1248 ntBASIC15.03■□□□□ -0
SNX18Q96RF0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.03■□□□□ -0
SNX18Q96RF0 MIR4492-201ENST00000581627 80 ntBASIC15.03■□□□□ -0
SNX18Q96RF0 AL805961.1-202ENST00000641562 540 ntBASIC15.03■□□□□ -0
SNX18Q96RF0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SNX18Q96RF0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.03■□□□□ -0
SNX18Q96RF0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SNX18Q96RF0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SNX18Q96RF0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.03■□□□□ -0
SNX18Q96RF0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.03■□□□□ -0
SNX18Q96RF0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.03■□□□□ -0
SNX18Q96RF0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNX18Q96RF0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SNX18Q96RF0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SNX18Q96RF0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNX18Q96RF0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.02■□□□□ -0
SNX18Q96RF0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNX18Q96RF0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
SNX18Q96RF0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.02■□□□□ -0
SNX18Q96RF0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
SNX18Q96RF0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNX18Q96RF0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
SNX18Q96RF0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.02■□□□□ -0
SNX18Q96RF0 ME2P1-201ENST00000426028 1970 ntBASIC15.02■□□□□ -0
SNX18Q96RF0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNX18Q96RF0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNX18Q96RF0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.02■□□□□ -0
SNX18Q96RF0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.02■□□□□ -0
SNX18Q96RF0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.02■□□□□ -0
SNX18Q96RF0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.02■□□□□ -0
SNX18Q96RF0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SNX18Q96RF0 AL590627.1-203ENST00000421194 1026 ntBASIC15.02■□□□□ -0
SNX18Q96RF0 AF186996.4-201ENST00000467186 377 ntBASIC15.02■□□□□ -0
SNX18Q96RF0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.02■□□□□ -0
SNX18Q96RF0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.02■□□□□ -0
SNX18Q96RF0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.02■□□□□ -0
SNX18Q96RF0 SART3-203ENST00000546611 1184 ntBASIC15.02■□□□□ -0
SNX18Q96RF0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.02■□□□□ -0
SNX18Q96RF0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.02■□□□□ -0
SNX18Q96RF0 MTDHP4-201ENST00000600287 670 ntBASIC15.02■□□□□ -0
SNX18Q96RF0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
SNX18Q96RF0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.02■□□□□ -0
SNX18Q96RF0 AL773604.1-201ENST00000617417 272 ntBASIC15.02■□□□□ -0
SNX18Q96RF0 REXO1L3P-201ENST00000622202 1288 ntBASIC15.02■□□□□ -0
SNX18Q96RF0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.02■□□□□ -0
SNX18Q96RF0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SNX18Q96RF0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
SNX18Q96RF0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.02□□□□□ -0.01
SNX18Q96RF0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.02□□□□□ -0.01
SNX18Q96RF0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SNX18Q96RF0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.02□□□□□ -0.01
SNX18Q96RF0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SNX18Q96RF0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
SNX18Q96RF0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.02□□□□□ -0.01
SNX18Q96RF0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.02□□□□□ -0.01
SNX18Q96RF0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 MTHFR-217ENST00000641820 1569 ntBASIC15.02□□□□□ -0.01
SNX18Q96RF0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SNX18Q96RF0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SNX18Q96RF0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms