Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
C9orf72Q96LT7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
C9orf72Q96LT7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.97■□□□□ 0.31
C9orf72Q96LT7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C9orf72Q96LT7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C9orf72Q96LT7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.97■□□□□ 0.31
C9orf72Q96LT7 AP002414.2-201ENST00000591780 3365 ntBASIC16.97■□□□□ 0.31
C9orf72Q96LT7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 AL022326.1-202ENST00000641533 845 ntBASIC16.96■□□□□ 0.31
C9orf72Q96LT7 AC107918.4-202ENST00000641623 219 ntBASIC16.96■□□□□ 0.31
C9orf72Q96LT7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.96■□□□□ 0.31
C9orf72Q96LT7 AC104640.1-201ENST00000562617 2109 ntBASIC16.96■□□□□ 0.3
C9orf72Q96LT7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
C9orf72Q96LT7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.96■□□□□ 0.3
C9orf72Q96LT7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 PAWRP1-201ENST00000451083 565 ntBASIC16.95■□□□□ 0.3
C9orf72Q96LT7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 AC012640.2-201ENST00000561606 901 ntBASIC16.95■□□□□ 0.3
C9orf72Q96LT7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 AC008735.5-201ENST00000623544 497 ntBASIC16.95■□□□□ 0.3
C9orf72Q96LT7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf72Q96LT7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms