Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.57□□□□□ -0.4
SMIM12Q96EX1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 SPDYE15P-201ENST00000424157 909 ntBASIC12.57□□□□□ -0.4
SMIM12Q96EX1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.57□□□□□ -0.4
SMIM12Q96EX1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 AL512652.2-201ENST00000625156 1716 ntBASIC12.57□□□□□ -0.4
SMIM12Q96EX1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
SMIM12Q96EX1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 AL671710.1-201ENST00000610245 2349 ntBASIC12.56□□□□□ -0.4
SMIM12Q96EX1 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 AC087386.2-201ENST00000623212 4637 ntBASIC12.56□□□□□ -0.4
SMIM12Q96EX1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 GCSHP5-201ENST00000443090 522 ntBASIC12.56□□□□□ -0.4
SMIM12Q96EX1 NUS1P1-201ENST00000446295 882 ntBASIC12.56□□□□□ -0.4
SMIM12Q96EX1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 AL023973.1-201ENST00000624619 620 ntBASIC12.56□□□□□ -0.4
SMIM12Q96EX1 PGM5P2-202ENST00000637225 1043 ntBASIC12.56□□□□□ -0.4
SMIM12Q96EX1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.56□□□□□ -0.4
SMIM12Q96EX1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms