Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 AF228730.6-201ENST00000641497 218 ntBASIC17.74■□□□□ 0.43
PGBD4Q96DM1 AC084121.3-201ENST00000641716 218 ntBASIC17.74■□□□□ 0.43
PGBD4Q96DM1 AC105233.6-201ENST00000642093 218 ntBASIC17.74■□□□□ 0.43
PGBD4Q96DM1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD4Q96DM1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 RPL37AP1-201ENST00000412502 279 ntBASIC17.73■□□□□ 0.43
PGBD4Q96DM1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.73■□□□□ 0.43
PGBD4Q96DM1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 SERBP1P5-201ENST00000510079 1181 ntBASIC17.73■□□□□ 0.43
PGBD4Q96DM1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 BANF1P1-201ENST00000553684 263 ntBASIC17.73■□□□□ 0.43
PGBD4Q96DM1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 AL079307.3-201ENST00000556114 283 ntBASIC17.73■□□□□ 0.43
PGBD4Q96DM1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 AC239800.4-201ENST00000603712 296 ntBASIC17.73■□□□□ 0.43
PGBD4Q96DM1 AL133215.2-201ENST00000609242 977 ntBASIC17.73■□□□□ 0.43
PGBD4Q96DM1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PGBD4Q96DM1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 GGT4P-201ENST00000623672 1708 ntBASIC17.72■□□□□ 0.43
PGBD4Q96DM1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms