Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARRDC3Q96B67 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARRDC3Q96B67 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 SERBP1P5-201ENST00000510079 1181 ntBASIC16.29■□□□□ 0.2
ARRDC3Q96B67 AC009407.1-201ENST00000568958 598 ntBASIC16.29■□□□□ 0.2
ARRDC3Q96B67 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.29■□□□□ 0.2
ARRDC3Q96B67 AC026979.3-201ENST00000607315 403 ntBASIC16.29■□□□□ 0.2
ARRDC3Q96B67 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.29■□□□□ 0.2
ARRDC3Q96B67 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 FAM207CP-201ENST00000443486 507 ntBASIC16.28■□□□□ 0.2
ARRDC3Q96B67 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 AL365330.1-201ENST00000607459 531 ntBASIC16.28■□□□□ 0.2
ARRDC3Q96B67 AC008738.7-201ENST00000609744 511 ntBASIC16.28■□□□□ 0.2
ARRDC3Q96B67 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
ARRDC3Q96B67 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARRDC3Q96B67 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms