Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE4Q96A23 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.77□□□□□ -0.04
CPNE4Q96A23 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
CPNE4Q96A23 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE4Q96A23 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE4Q96A23 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.77□□□□□ -0.04
CPNE4Q96A23 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE4Q96A23 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
CPNE4Q96A23 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CPNE4Q96A23 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CPNE4Q96A23 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CPNE4Q96A23 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 AC005237.2-201ENST00000434368 219 ntBASIC14.77□□□□□ -0.05
CPNE4Q96A23 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 AC027307.2-201ENST00000591252 911 ntBASIC14.77□□□□□ -0.05
CPNE4Q96A23 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE4Q96A23 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CPNE4Q96A23 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 AC023141.5-201ENST00000458585 616 ntBASIC14.76□□□□□ -0.05
CPNE4Q96A23 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 AC073389.1-201ENST00000595595 795 ntBASIC14.76□□□□□ -0.05
CPNE4Q96A23 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE4Q96A23 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CPNE4Q96A23 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 AC073439.1-201ENST00000624121 1774 ntBASIC14.75□□□□□ -0.05
CPNE4Q96A23 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 AC092850.2-201ENST00000623821 2697 ntBASIC14.75□□□□□ -0.05
CPNE4Q96A23 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 AL627223.1-201ENST00000416693 442 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms