Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 RPL13AP25-201ENST00000484130 612 ntBASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 MIR6749-201ENST00000617008 69 ntBASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 BAK1P1-201ENST00000317045 636 ntBASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 KRT18P64-201ENST00000434946 1219 ntBASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 RNMTL1P1-201ENST00000454103 560 ntBASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 NDUFAB1P1-201ENST00000404262 460 ntBASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 SLC25A1P3-201ENST00000395415 828 ntBASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 SCARNA12-201ENST00000459155 270 ntBASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AC106047.2-201ENST00000511723 743 ntBASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 LINC00895-201ENST00000629028 1637 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC007881.1-201ENST00000437460 187 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 CR383656.3-201ENST00000551315 183 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms