Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 AC092474.2-201ENST00000424288 719 ntBASIC16.08■□□□□ 0.16
ATL1Q8WXF7 AC074386.1-202ENST00000463561 864 ntBASIC16.08■□□□□ 0.16
ATL1Q8WXF7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 KRT18P34-201ENST00000488218 1270 ntBASIC16.08■□□□□ 0.16
ATL1Q8WXF7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 PDPK2P-202ENST00000562415 1191 ntBASIC16.08■□□□□ 0.16
ATL1Q8WXF7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 AC068137.2-201ENST00000605408 478 ntBASIC16.08■□□□□ 0.16
ATL1Q8WXF7 AL161645.1-201ENST00000622716 1255 ntBASIC16.08■□□□□ 0.16
ATL1Q8WXF7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 HYMAI-201ENST00000635591 3347 ntBASIC16.08■□□□□ 0.16
ATL1Q8WXF7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.07■□□□□ 0.16
ATL1Q8WXF7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATL1Q8WXF7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms