Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 IGHV3-41-201ENST00000613121 348 ntBASIC14.26□□□□□ -0.13
BEST4Q8NFU0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 AD001527.2-201ENST00000622994 785 ntBASIC14.26□□□□□ -0.13
BEST4Q8NFU0 AC073592.5-201ENST00000624854 528 ntBASIC14.26□□□□□ -0.13
BEST4Q8NFU0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 AL359258.3-201ENST00000622910 2331 ntBASIC14.25□□□□□ -0.13
BEST4Q8NFU0 AP003680.1-201ENST00000598970 3660 ntBASIC14.25□□□□□ -0.13
BEST4Q8NFU0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 AL645929.1-201ENST00000420084 975 ntBASIC14.25□□□□□ -0.13
BEST4Q8NFU0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
BEST4Q8NFU0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 GGT4P-201ENST00000623672 1708 ntBASIC14.24□□□□□ -0.13
BEST4Q8NFU0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms