Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 AC005622.1-201ENST00000636801 1703 ntBASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 AC024267.1-201ENST00000582320 895 ntBASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC38A9Q8NBW4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 SPTLC1P1-201ENST00000447199 261 ntBASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 AC009118.2-201ENST00000613275 655 ntBASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 AC106886.4-201ENST00000623557 2502 ntBASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 AC092171.3-201ENST00000610122 2651 ntBASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC38A9Q8NBW4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.39■□□□□ 0.05
SLC38A9Q8NBW4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms