Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 AC092850.2-201ENST00000623821 2697 ntBASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 AC106795.1-205ENST00000512851 1056 ntBASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 AL662844.1-201ENST00000546340 181 ntBASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 AP001269.4-201ENST00000609611 512 ntBASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 AL671710.1-201ENST00000610245 2349 ntBASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CRLF3Q8IUI8 AC097637.2-201ENST00000624096 1997 ntBASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 AP005117.1-202ENST00000581724 1908 ntBASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 FAM197Y8-203ENST00000450145 560 ntBASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 AC148477.5-201ENST00000625164 1645 ntBASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 PMPCAP1-201ENST00000508114 1576 ntBASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CRLF3Q8IUI8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms