Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 CICP6-201ENST00000457191 2729 ntBASIC17.11■□□□□ 0.33
RFX6Q8HWS3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 AC022188.1-201ENST00000620960 1664 ntBASIC17.1■□□□□ 0.33
RFX6Q8HWS3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 AC005622.1-201ENST00000636801 1703 ntBASIC17.1■□□□□ 0.33
RFX6Q8HWS3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 AC079776.4-201ENST00000511039 504 ntBASIC17.1■□□□□ 0.33
RFX6Q8HWS3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 AC096734.2-201ENST00000562054 433 ntBASIC17.1■□□□□ 0.33
RFX6Q8HWS3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 Z83851.2-201ENST00000609564 659 ntBASIC17.1■□□□□ 0.33
RFX6Q8HWS3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RFX6Q8HWS3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 AC007950.2-201ENST00000615045 2347 ntBASIC17.09■□□□□ 0.33
RFX6Q8HWS3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.09■□□□□ 0.33
RFX6Q8HWS3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 AC024909.3-201ENST00000611513 2257 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms