Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 KLF4P1-201ENST00000412782 1185 ntBASIC15.53■□□□□ 0.08
LPCAT4Q643R3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 AC005912.2-201ENST00000619492 2400 ntBASIC15.53■□□□□ 0.08
LPCAT4Q643R3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 AL365209.1-201ENST00000624418 6473 ntBASIC15.52■□□□□ 0.08
LPCAT4Q643R3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 MIR648-201ENST00000385046 94 ntBASIC15.52■□□□□ 0.08
LPCAT4Q643R3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LPCAT4Q643R3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 AL161772.1-201ENST00000610494 4412 ntBASIC15.52■□□□□ 0.07
LPCAT4Q643R3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LPCAT4Q643R3 AC232323.1-201ENST00000540724 2099 ntBASIC15.52■□□□□ 0.07
LPCAT4Q643R3 REXO1L5P-201ENST00000622260 2098 ntBASIC15.52■□□□□ 0.07
LPCAT4Q643R3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 FAM220CP-201ENST00000395253 831 ntBASIC15.51■□□□□ 0.07
LPCAT4Q643R3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms