Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VARS2Q5ST30 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.33■□□□□ 0.36
VARS2Q5ST30 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VARS2Q5ST30 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.33■□□□□ 0.36
VARS2Q5ST30 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 PKD1P1-201ENST00000458669 6805 ntBASIC17.32■□□□□ 0.36
VARS2Q5ST30 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 AP005018.1-201ENST00000525475 301 ntBASIC17.32■□□□□ 0.36
VARS2Q5ST30 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 CR383656.12-201ENST00000549567 513 ntBASIC17.32■□□□□ 0.36
VARS2Q5ST30 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 AC026979.3-201ENST00000607315 403 ntBASIC17.32■□□□□ 0.36
VARS2Q5ST30 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VARS2Q5ST30 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VARS2Q5ST30 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 SPTLC1P1-201ENST00000447199 261 ntBASIC17.31■□□□□ 0.36
VARS2Q5ST30 CRB3P1-201ENST00000449338 276 ntBASIC17.31■□□□□ 0.36
VARS2Q5ST30 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 AC027307.3-201ENST00000594262 1100 ntBASIC17.31■□□□□ 0.36
VARS2Q5ST30 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.31■□□□□ 0.36
VARS2Q5ST30 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VARS2Q5ST30 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
VARS2Q5ST30 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms