Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 MTND6P24-201ENST00000440466 518 ntBASIC22.52■■□□□ 1.2
CDCA8Q53HL2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 IGHV3-42-201ENST00000520410 361 ntBASIC22.52■■□□□ 1.2
CDCA8Q53HL2 AC027369.6-201ENST00000525520 931 ntBASIC22.52■■□□□ 1.2
CDCA8Q53HL2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 AL589739.1-201ENST00000607720 493 ntBASIC22.52■■□□□ 1.2
CDCA8Q53HL2 AL138828.2-201ENST00000615812 383 ntBASIC22.52■■□□□ 1.2
CDCA8Q53HL2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 AC005052.1-201ENST00000625181 2492 ntBASIC22.52■■□□□ 1.2
CDCA8Q53HL2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CDCA8Q53HL2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 AC241585.1-201ENST00000433527 519 ntBASIC22.51■■□□□ 1.19
CDCA8Q53HL2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 AC093214.1-201ENST00000511688 1107 ntBASIC22.51■■□□□ 1.19
CDCA8Q53HL2 AL079307.3-201ENST00000556114 283 ntBASIC22.51■■□□□ 1.19
CDCA8Q53HL2 SPCS2P1-201ENST00000561636 679 ntBASIC22.51■■□□□ 1.19
CDCA8Q53HL2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 AL096865.1-201ENST00000606796 927 ntBASIC22.51■■□□□ 1.19
CDCA8Q53HL2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CDCA8Q53HL2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 SPDYE17-201ENST00000412399 783 ntBASIC22.5■■□□□ 1.19
CDCA8Q53HL2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDCA8Q53HL2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 AL390754.1-201ENST00000619088 582 ntBASIC22.49■■□□□ 1.19
CDCA8Q53HL2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDCA8Q53HL2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDCA8Q53HL2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC22.48■■□□□ 1.19
CDCA8Q53HL2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.48■■□□□ 1.19
CDCA8Q53HL2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CDCA8Q53HL2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC22.48■■□□□ 1.19
CDCA8Q53HL2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDCA8Q53HL2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDCA8Q53HL2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms