Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 PRYP5-201ENST00000451909 266 ntBASIC12.65□□□□□ -0.38
HIST1H1AQ02539 SCARNA2-201ENST00000458748 420 ntBASIC12.65□□□□□ -0.38
HIST1H1AQ02539 KRT18P31-201ENST00000506277 1292 ntBASIC12.65□□□□□ -0.38
HIST1H1AQ02539 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 AC008608.2-201ENST00000606089 416 ntBASIC12.65□□□□□ -0.38
HIST1H1AQ02539 AL139424.1-201ENST00000607572 797 ntBASIC12.65□□□□□ -0.38
HIST1H1AQ02539 AC144831.1-201ENST00000573312 2656 ntBASIC12.65□□□□□ -0.38
HIST1H1AQ02539 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.39
HIST1H1AQ02539 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
HIST1H1AQ02539 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 MTHFR-217ENST00000641820 1569 ntBASIC12.64□□□□□ -0.39
HIST1H1AQ02539 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 SBF1P1-201ENST00000444527 5631 ntBASIC12.64□□□□□ -0.39
HIST1H1AQ02539 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 AC139887.3-201ENST00000568585 713 ntBASIC12.64□□□□□ -0.39
HIST1H1AQ02539 TERC-201ENST00000602385 541 ntBASIC12.64□□□□□ -0.39
HIST1H1AQ02539 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 AL589182.2-201ENST00000619332 1049 ntBASIC12.64□□□□□ -0.39
HIST1H1AQ02539 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1AQ02539 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1AQ02539 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1AQ02539 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HIST1H1AQ02539 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1AQ02539 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1AQ02539 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms